In the age of AI Agents like Codex and WorkBuddy, maintaining complex graph tags and manual bidirectional links creates unnecessary friction.
Treat your local folders of Markdown, PDF, and Office files as the single source of truth, letting Agents search, summarize, and cross-reference on demand.
What to learn
Adopt a 3-layer architecture: open data formats, autonomous AI Agents, and lightweight presentation tools.
Focus on active task workspaces rather than elaborate filing taxonomies.